Protein Info for BWI76_RS00620 in Klebsiella michiganensis M5al

Annotation: putative glycoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 459 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF16966: Porin_8" amino acids 101 to 459 (359 residues), 520.6 bits, see alignment E=9.8e-161

Best Hits

KEGG orthology group: None (inferred from 76% identity to ecp:ECP_4110)

Predicted SEED Role

"Putative glycoporin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AVP6 at UniProt or InterPro

Protein Sequence (459 amino acids)

>BWI76_RS00620 putative glycoprotein (Klebsiella michiganensis M5al)
MNKKALSIAMGLSLITGSAVAKNNHLTLEQRMEQLEARLAAAENRATVAEEQVRNLQTQQ
DAAIQAAQTSVAVKSVAPAAESKKNMTAPELKLTGYGDLKIYGDVEFNMDAESKRGLLAM
TNADVGSDPTYENWDLNGRILLGFDGMRKTDSGYFAGFTVQPLADMTGSMNLDDAAFFFG
QENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYSDGHGYIYMMKEGRGRSDAGGNF
LLSKQLDNWYFELNTLLEDGTSLYNDGGYHGRDMDQKKNVAYLRPVVSWAKDEVSVAAAM
EANVVQNAYGYHDAQGNFVDQSGRTGYGLTMTWNGLKSDPDNGVVVNLNTAYMDASNEKD
FTTGVNALWRRFELGYIYAHNKISDYAGVICENDCWIKDEGTYNIHTIHASYQIPNVMNM
QNFNIYLGAYYSILDSDDKLSQSDDDDRYGARLRFKYFF