Protein Info for BPHYT_RS31160 in Burkholderia phytofirmans PsJN

Annotation: GCN5 family acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 239 PF00583: Acetyltransf_1" amino acids 135 to 217 (83 residues), 58.2 bits, see alignment E=2e-19 PF13508: Acetyltransf_7" amino acids 137 to 218 (82 residues), 46.3 bits, see alignment E=9.3e-16 PF13673: Acetyltransf_10" amino acids 138 to 218 (81 residues), 42.4 bits, see alignment E=1.4e-14 PF08445: FR47" amino acids 140 to 221 (82 residues), 73.8 bits, see alignment E=1.8e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_6287)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TB18 at UniProt or InterPro

Protein Sequence (239 amino acids)

>BPHYT_RS31160 GCN5 family acetyltransferase (Burkholderia phytofirmans PsJN)
MSSSTEADLDRPIWAALTTKQAHLGYGDALAVRYHPDVAPFAALALETPAAYQALLQLLL
PHEQAAVLRSSDPVGPIDGLQITHVGVIHQMIARHGKAERADDHDVIRLGDADAKDMLDL
AQKTKPGPFGRRTGEMGHYIGVRDQGRLIAMAGERMRVDGYVEISAVCVDEDYRGRGLAG
RLIKVLRREIEQREDTPFLHVFSNNTSAIGLYERLGFELRRTFQLTRVGHVDSRSATAP