Protein Info for BPHYT_RS31075 in Burkholderia phytofirmans PsJN

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 379 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 26 to 44 (19 residues), see Phobius details amino acids 53 to 71 (19 residues), see Phobius details amino acids 77 to 95 (19 residues), see Phobius details amino acids 107 to 126 (20 residues), see Phobius details amino acids 161 to 181 (21 residues), see Phobius details amino acids 189 to 212 (24 residues), see Phobius details amino acids 223 to 245 (23 residues), see Phobius details amino acids 319 to 337 (19 residues), see Phobius details amino acids 348 to 374 (27 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_6270)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TB01 at UniProt or InterPro

Protein Sequence (379 amino acids)

>BPHYT_RS31075 hypothetical protein (Burkholderia phytofirmans PsJN)
MRASLLLTAILLVSGGWIVVVRVGNSAMIAAIVVVLFCSFLVSVRFPRAIRGSYGILVIA
ILVASYVQDFQIDDKELFVILKALIAGVACIYFKRTRRDFRELFVDVMYYMAIISLVLYP
LAYVAPGIARHIDDEYSTVFGLLYVRSTDLQRFNHYRNQGIFWEAGVYGVMLTMAFAYNF
LKYKKRPNWVFLLAALSTQSMGALSVLMPFAAYCYMHQRQPRLANLAAIMLGVVVTLVLA
APGAIDDAFSTLFGRSLQGDSSITVRINDMTLGARAAADSLLLGRPSGDLDAYNALALDE
YGYIKENDAGISNSITGMIYKYGVPVTVIYCWVLWLRVRRDFGGMAPLVFAVFTGLLMIE
PLGLSIFVFMLLAYRDYPS