Protein Info for BPHYT_RS30400 in Burkholderia phytofirmans PsJN

Annotation: amidohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 622 PF07969: Amidohydro_3" amino acids 60 to 542 (483 residues), 439.8 bits, see alignment E=2.1e-135 PF01979: Amidohydro_1" amino acids 375 to 540 (166 residues), 29.3 bits, see alignment E=5.3e-11

Best Hits

KEGG orthology group: K07047, (no description) (inferred from 100% identity to bpy:Bphyt_6132)

Predicted SEED Role

"Exoenzymes regulatory protein AepA precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TAW1 at UniProt or InterPro

Protein Sequence (622 amino acids)

>BPHYT_RS30400 amidohydrolase (Burkholderia phytofirmans PsJN)
MTSTPSAPTPAEVVFFNGKIATQDDKRSFADALAVANGRIVAAGSRDAVMRHANDATRHV
DLKGRTVIPGLNDSHLHIIRGGLNFNMELRWDGVPSLADALDMLRKQVARTPAPQWVRVV
GGWNEFQFAERRGPTLEEINAIAPDTPVFILHLYDSALLNAAALRAVGYTKDTPNPPGGE
IQRDKRGNPTGMLIARPNAGLLYATLAKGPKLALEDQRNSTRHFMRELNRLGVTSAIDAG
GGYQAYPDDYAVIMDMAKHSELTVRIAYNLFTQNAKKEIEDFAKWVKMTKPGEGDDFLRV
NGAGEMLVFSAADFEDFLEPRPDLPDSLEDELEAVVKLLVANRWPFRLHATYNESIERFL
NVFERVDAEIPFNGLRWFFDHCETITQKNIERVRALGGGIAIQHRMAYQGEYFIHQYGEE
AVKRTPPMRHMLDAGLPVGAGTDATRVASFNPFVSLYWMVSGKTVGGTSMYGSENKLDRM
EALRRYTVGSAWFSNEEDRKGALVPGQFADFAVLSEDFFTVDESRIKFLTSNMTVVGGKV
VYADDEFAPLAPPDLPVSPSWSPVAEFGGYSRYKPTAVACVDGCVNLCGVHAHAHGWAWR
KNVPVSDSNGFWGALGCSCFAF