Protein Info for BPHYT_RS24315 in Burkholderia phytofirmans PsJN

Annotation: phosphoribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 transmembrane" amino acids 32 to 56 (25 residues), see Phobius details PF00156: Pribosyltran" amino acids 33 to 131 (99 residues), 30.5 bits, see alignment E=1e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4897)

Predicted SEED Role

"FIG00461467: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TC41 at UniProt or InterPro

Protein Sequence (315 amino acids)

>BPHYT_RS24315 phosphoribosyltransferase (Burkholderia phytofirmans PsJN)
MNKPVLPLTYEQLDHWIESLQPALLAERFAMAIGILRGGAPLALMVSHAVGAPVAFLRYD
RLTRTVAWDSTLPIPPAGSTVLLCEDIAGRGFTLTDCIAFLQQQGLVVRTLTGAVDELSR
TQPDYAIDARGYFALFPWERQAYTERYRGDWARVESGAAPAMADDHEYATYAIDLDGILL
PDVPLARYDEDLAAALAERDALLPFEELPDIDLQQVRTIITGRPELDRARTEAWLARHGF
GHLQLVMRTPDTHDESPAGSAAHKAAAALRGGVTHFIESDPVQALLIAQQAPLLRVIWWD
AHTQTGLLVGARAWT