Protein Info for BPHYT_RS23660 in Burkholderia phytofirmans PsJN

Annotation: manganese transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 552 transmembrane" amino acids 43 to 61 (19 residues), see Phobius details amino acids 81 to 101 (21 residues), see Phobius details amino acids 122 to 146 (25 residues), see Phobius details amino acids 151 to 172 (22 residues), see Phobius details amino acids 184 to 205 (22 residues), see Phobius details amino acids 226 to 245 (20 residues), see Phobius details amino acids 266 to 290 (25 residues), see Phobius details amino acids 317 to 343 (27 residues), see Phobius details amino acids 363 to 382 (20 residues), see Phobius details amino acids 392 to 411 (20 residues), see Phobius details amino acids 429 to 450 (22 residues), see Phobius details amino acids 458 to 479 (22 residues), see Phobius details amino acids 529 to 550 (22 residues), see Phobius details PF01566: Nramp" amino acids 69 to 424 (356 residues), 259.2 bits, see alignment E=3.1e-81

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4770)

Predicted SEED Role

"Manganese transport protein MntH" in subsystem Transport of Manganese

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TDU5 at UniProt or InterPro

Protein Sequence (552 amino acids)

>BPHYT_RS23660 manganese transporter (Burkholderia phytofirmans PsJN)
MSTPINVSPPRSAVLDDAHLGDIKGALGTIAHHDTGARNSWWARVRTLLAILGPGLIVMV
GDNDAGAFGTYTQAGQNYGTTLLWTMLLLVPVLFVNQEMVLRLGAVTGVGHARLIFERFG
KFWGAFSVVDLFILNALTILTEFIGITFVLQFFGISKVAGVCIAAAVTMAAVSTGNFRRF
ERFAVVLCLMSLLLVPVLVSIHPLVSQMAHDFLIPGWPAHSKLSDVMLLVIGIVGTTVAP
WQLFFQQSYIVDKRITPRFMKYEKADLWIGIVFVMIGAVAMISFCAALYAGKPESGHFTD
AGGVIADLESYAGRTPAVLFAVALLDACIIGAAAVSLSTAYAIGDVFKIRHSLHRGVSDA
KGFYLVYFGIVAAAATLVLIPGSPLGLLTEAVQTLAGVLLPSATVFLLLLCNDRAVLGPW
VNSKKLNVFTGAVVWVLVMLSIILTASVMYPDITGEAMLEVLAGGTLMAVAGYAATVVVR
KLRRETGTASNHDSELRWSKETRAAWRMPPLDELPAPQLTMSKRVWMGVLRGYLIVAVAL
VIVKVVQMTLLH