Protein Info for BPHYT_RS20555 in Burkholderia phytofirmans PsJN

Annotation: serine/threonine protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 PF00560: LRR_1" amino acids 39 to 59 (21 residues), 12.7 bits, see alignment (E = 3.8e-05) PF13855: LRR_8" amino acids 105 to 163 (59 residues), 35.5 bits, see alignment E=2.1e-12 amino acids 129 to 185 (57 residues), 29.2 bits, see alignment 1.9e-10 PF07714: PK_Tyr_Ser-Thr" amino acids 208 to 368 (161 residues), 50.6 bits, see alignment E=5.3e-17 PF00069: Pkinase" amino acids 212 to 371 (160 residues), 41.8 bits, see alignment E=2.6e-14 PF06293: Kdo" amino acids 301 to 389 (89 residues), 23.6 bits, see alignment E=9.4e-09

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4131)

Predicted SEED Role

"serine/threonine protein kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TEJ4 at UniProt or InterPro

Protein Sequence (445 amino acids)

>BPHYT_RS20555 serine/threonine protein kinase (Burkholderia phytofirmans PsJN)
MTTTLDHLRAGQLAGTRRLKLACGLTEFPREIFDLADTLEVLDLSGNALTSLPDDLPRLR
KLRILFGSDNPFTELPEVLGQCSQLSMVGFKANRIRHVSGKALPPQLRWLILTDNEIEVL
PAEIGRCSQLQKLMLAGNRLRTLPEELAACSQLELLRLAANQLDGLPDWLLRLPRLSWLA
YAGNPFSEALEAAALTDTPSVAIAWHDLKLDAPLGEGASGVIYRAELAGRHGASRSVAVK
LFKGAVTSDGLPDCEMAACIRAGDHTNLIPVAGKVKDHPAGTHGLVMELIDPQFTNLAGP
PSLESCTRDIYDADTRFDMASALGIAYGIASAACHLHEQGIMHGDLYAHNILYGGEGRAL
LGDFGAASFYALGDRRIGLALQRLEVSAYGCLLEELLERCDWPEASANIRALLVELKDNC
LSEAIDSRPLFDEITARLLALMGDR