Protein Info for BPHYT_RS18350 in Burkholderia phytofirmans PsJN

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF11170: DUF2957" amino acids 65 to 411 (347 residues), 551.2 bits, see alignment E=4.4e-170

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_3682)

Predicted SEED Role

"Autotransporter adhesin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T6Q0 at UniProt or InterPro

Protein Sequence (414 amino acids)

>BPHYT_RS18350 hypothetical protein (Burkholderia phytofirmans PsJN)
MNWRILSVLALAAPLLGACGGGGGGDGPVTEVRLCPASLDYSTVFTGGGGDGELVKLQLD
TTKMTWQVNYIESPIPATTGTVVPTRAGQSASGTLTQETLLPTNKLNQCAFRLNGASLDP
NRPARIFVGEGVAGGTIPGAEISFGGILGVGAVPDTKFPYYPFIGFSSIETNLANVAGTY
NQLGYHQVPSQNFAPVAVDSKITINADGTWTECDNSGVNAGKCQQPGGNFAPAADGSGAF
QTNNFQGQAKPTLAATPEARGYMIVGKLRNQLVPILVRTGAANSSVTVPQNGALGPYADD
ESGISILAPQSAITVNSQNGEYIGVDSQFDYRTTALEGTEATLLDPFNASQASLATALNL
DFTQAVPGVVTTTKVGASTGTTPTGKMIFTGGVFGYLDLTNAASPYFTIGAFVQ