Protein Info for BPHYT_RS16635 in Burkholderia phytofirmans PsJN

Annotation: D-aminoacyl-tRNA deacylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase
  • amino acids 1 to 150 (150 residues), 174 bits, E=1.4e-55
• PF02580: Tyr_Deacylase
  • amino acids 3 to 149 (147 residues), 170.1 bits, E=1.9e-54

Best Hits

Swiss-Prot: 100% identical to DTD_PARPJ: D-aminoacyl-tRNA deacylase (dtd) from Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)

KEGG orthology group: K07560, D-tyrosyl-tRNA(Tyr) deacylase [EC: 3.1.-.-] (inferred from 98% identity to bxe:Bxe_A0612)

MetaCyc: 60% identical to D-aminoacyl-tRNA deacylase (Escherichia coli K-12 substr. MG1655)
RXN-15041 [EC: 3.1.1.96]; 3.1.1.96 [EC: 3.1.1.96]; 3.1.1.96 [EC: 3.1.1.96]; 3.1.1.96 [EC: 3.1.1.96]; 3.1.1.96 [EC: 3.1.1.96]

Predicted SEED Role

"D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1)" (EC 3.6.1.n1)

Isozymes

Compare fitness of predicted isozymes for: 3.1.-.-

Use Curated BLAST to search for 3.1.-.- or 3.1.1.96 or 3.6.1.n1

Sequence Analysis Tools

See B2SYK5 at UniProt or InterPro

Protein Sequence (152 amino acids)

>BPHYT_RS16635 D-aminoacyl-tRNA deacylase (Burkholderia phytofirmans PsJN)
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDSEAAADRLLAKVLGYRVFSDAAG
KMNLSVQNLDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARA
KHPIVETGEFGADMQVSLVNDGPVTFWLQTNA