Protein Info for BPHYT_RS11185 in Burkholderia phytofirmans PsJN
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 57% identical to Y4806_PSEPW: UPF0229 protein PputW619_4806 (PputW619_4806) from Pseudomonas putida (strain W619)
KEGG orthology group: K09786, hypothetical protein (inferred from 100% identity to bpy:Bphyt_2256)Predicted SEED Role
"FIG002076: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See B2T4Z4 at UniProt or InterPro
Protein Sequence (423 amino acids)
>BPHYT_RS11185 hypothetical protein (Burkholderia phytofirmans PsJN) MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSEAVRDRSIKDIQNTQSITIPRKDI AEPSFRHGPGGKREMVHPGNSDYIRGDKIQRPQGGGGGGGGNQASNEGEGQDDFVFELSR EEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTPNNIDVVRSLRSALGRRIALG APLVNQLHEMERQLEVMKADPDDRREEIKLLEEEIHHLRGRIWRIPFIDPFDLRYVNRVK QPTPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEV DEDTFFHSTESGGTVVSSALELMQKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKIL SDDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMKKVETAADIYPVFRELFEKQA ANS