Protein Info for BPHYT_RS10430 in Burkholderia phytofirmans PsJN

Annotation: glycosyl transferase family 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 PF13439: Glyco_transf_4" amino acids 15 to 160 (146 residues), 67.9 bits, see alignment E=3.5e-22 PF13579: Glyco_trans_4_4" amino acids 16 to 157 (142 residues), 55.7 bits, see alignment E=2.3e-18 PF13477: Glyco_trans_4_2" amino acids 22 to 114 (93 residues), 27.4 bits, see alignment E=1.1e-09 PF00534: Glycos_transf_1" amino acids 171 to 333 (163 residues), 125.6 bits, see alignment E=4.5e-40 PF13692: Glyco_trans_1_4" amino acids 185 to 321 (137 residues), 108.5 bits, see alignment E=1e-34 PF13524: Glyco_trans_1_2" amino acids 263 to 349 (87 residues), 39.6 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_2105)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T4J5 at UniProt or InterPro

Protein Sequence (371 amino acids)

>BPHYT_RS10430 glycosyl transferase family 1 (Burkholderia phytofirmans PsJN)
MKALSVLHSESSRGWGGQEVRTLKEMVALRALGHNVELVCPEDARLGIRARADGFAVHHA
RMRAGGDLRSMVTIRSLLARRRFDVLNTHSGHDSLVAGMAGRLAGTPFIVRTRHLALPIT
SLATYNWLPHRVVAVSHHVRDYLISAGVQEDRVETIYDGILKPEAATGSTLRDELGLDAD
ATIAGMVAIMREKKGHEDLIAAVRPMLAERPNLHVVMAGDGVWFEKIKAIVDGMGLAHRI
HLLGFRTDITNVLRGCDLFVLPTHQEALGQSFIEAMAVGLPVIGTRVDGVPELIDDGVNG
LLVPAHDVDSLRSALARLIDDAPLRARLGLAARLKTDNRFTVDAMANETVDCYLRGIYAG
RAYYGERRAAA