Protein Info for BPHYT_RS09740 in Burkholderia phytofirmans PsJN

Annotation: glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 PF13692: Glyco_trans_1_4" amino acids 233 to 318 (86 residues), 39.4 bits, see alignment E=1.1e-13 PF00534: Glycos_transf_1" amino acids 234 to 326 (93 residues), 35.6 bits, see alignment E=1e-12 PF13524: Glyco_trans_1_2" amino acids 271 to 348 (78 residues), 31.3 bits, see alignment E=3e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_1961)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T458 at UniProt or InterPro

Protein Sequence (392 amino acids)

>BPHYT_RS09740 glycosyl transferase (Burkholderia phytofirmans PsJN)
MSTKVHVHLFYGADPRFYRPGDNIGCLYGYHHAESDAFKLTYSQDARESKPVRLLRRALK
AALGFDFIHTWRNRAEMLRSDVIWTHTEQEWLSAALMLLLSGRKAGADASPLLLAQSVWL
LDKWPSYGILRSWLYRKLMARADQLTTLASENAELCQRYFARDAKPLLYGLNTHDFPVKT
PAEWTPHTPIRIAAIGNDRDRDWETLIKAFGNDARYTVKLATRRRIPTSLRAPNVEIALF
SGIKKQHELYDWADVIVVPLRPNSHASGITVMLEAAAVGKPMVVTNVGALQDYFPAGEAF
YIPPFNPQALREAVDQLAAAPLDALRQAQAAAAGLLSRDLTTQHYAMQHVRITQEMLRAR
AAARTRSAAGMATAAGVSESERRPARQSRGGL