Protein Info for BPHYT_RS09085 in Burkholderia phytofirmans PsJN

Annotation: mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF00005: ABC_tran" amino acids 29 to 167 (139 residues), 102.4 bits, see alignment E=1.6e-33

Best Hits

Swiss-Prot: 41% identical to TAUB_RHIEC: Taurine import ATP-binding protein TauB (tauB) from Rhizobium etli (strain CFN 42 / ATCC 51251)

KEGG orthology group: K02049, sulfonate/nitrate/taurine transport system ATP-binding protein (inferred from 100% identity to bpy:Bphyt_1831)

Predicted SEED Role

"ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" in subsystem Alkanesulfonate assimilation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T3S8 at UniProt or InterPro

Protein Sequence (270 amino acids)

>BPHYT_RS09085 mannosyltransferase (Burkholderia phytofirmans PsJN)
MTVAALALDNITCTFAARDNRAQRYTAVKETTLRIAPGEFVSVVGPTGCGKSTLLNVGAG
LLGPSSGTVSVFGEPLKGINRRAGYMFQADALMPWRSAIDNVMAGLAFHGVPPAEARSKA
DEWLKRVGLGGFGDRYPHQLSGGMRKRVAMAQTLILDPDIILMDEPFSALDIQTRQLMEN
ELLDLWAAKRKAVLFITHDLDEAIAMSDRVVVLSAGPGTHPIGEFTIDLPRPRDVAEIRS
HPRFVELHAQIWSVLRDEVLKGYQQQLTAV