Protein Info for BPHYT_RS08495 in Burkholderia phytofirmans PsJN

Annotation: beta-mannosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 882 PF00703: Glyco_hydro_2" amino acids 233 to 330 (98 residues), 31.3 bits, see alignment E=1.6e-11

Best Hits

KEGG orthology group: K01192, beta-mannosidase [EC: 3.2.1.25] (inferred from 100% identity to bpy:Bphyt_1715)

Predicted SEED Role

"Beta-mannosidase (EC 3.2.1.25)" in subsystem Mannose Metabolism (EC 3.2.1.25)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T3G2 at UniProt or InterPro

Protein Sequence (882 amino acids)

>BPHYT_RS08495 beta-mannosidase (Burkholderia phytofirmans PsJN)
MDGLTIDLVPDEGGASGVLAPTPDEAAQTDADANGASLARVSQTLWPRRLDTGWQCVSTP
AGACASPADLPTHGWLAAQVPGTVASARRAAGLLDLAHPPPLAFDDHWYCLALEGTGRRR
LRLHGLATIAEVWLDGVKRLDSDSMFVAHDLDIELNGSATLALCFRSLTPALTAKRSRAR
WRPRLVSPPTLRNVRTTLLGHMPGWCPSVQAVGPWRPVELLSDAPHAFDNVDVSSHIELN
DDGLASGLVTVTLRFVHPHDDAACRASLKCGDAVSSLQWSNAYTLTGSVRVSDAKRWWPH
THGEPTLYPLTLQLDDGHATSHALGSVGFRSIEVDRGADGMGFALRLNGVPVFCRGACWT
SADLVTLAGSEAQLRHAFTLARDAGMNMLRVGGTMVYESDAFYALADEYGMLVWQDFALA
NFDYPNDAAFSASIEREATQFLTRTRRFASLAMLCGGSEVDQQAAMFGLPPSMRAQPLFT
EQLPAIVARERPDVPYVGNSPSGGVWPFSTNEGVTHYYGVGAYQRPLDDVRRSQVRFAAE
CLAFANVPDDATLHDALGTIHLHDPRWKAAVPRDPGSGWDFDDVRDHYLQTLYGVEPARL
RYEDPERYLDLSRAVVAELMGDVFAEWRRAGSSCGGALVWQLQDLRPGAGWGLIDATGRP
KSALHGLAQALQPIQAVITDEGLNGLDIHLLNERAQPLRAQLELVCLRDGSVKVASASRE
VELAPHSVQRLSAAACLGQFFDFTHAYRFGPRAHDVTIATLRDLASGEVVAEAFHLPERR
VSERHDLGLTVSVERNGDNWQLMIEAKRFVRFVHIVDTHYRAARDWFHLPPNRPCIVPLI
ALASQERFVAQASSGVFQADATYPAPAGEVRAVNALSAIFYG