Protein Info for BPHYT_RS05170 in Burkholderia phytofirmans PsJN

Annotation: cell division topological specificity factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 84 TIGR01215: cell division topological specificity factor MinE" amino acids 1 to 82 (82 residues), 97.9 bits, see alignment E=1.3e-32 PF03776: MinE" amino acids 14 to 82 (69 residues), 83.8 bits, see alignment E=3.4e-28

Best Hits

Swiss-Prot: 100% identical to MINE_PARPJ: Cell division topological specificity factor (minE) from Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)

KEGG orthology group: K03608, cell division topological specificity factor (inferred from 98% identity to bgf:BC1003_0907)

Predicted SEED Role

"Cell division topological specificity factor MinE" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T1B8 at UniProt or InterPro

Protein Sequence (84 amino acids)

>BPHYT_RS05170 cell division topological specificity factor (Burkholderia phytofirmans PsJN)
MSILSFLLGEKKKSASVAKERLQLIIAHERAGGHAPADYLPALQRELVAVISKYVKISHD
DIRVSLERQDDLEVLEVKIEIPQA