Protein Info for BPHYT_RS04505 in Burkholderia phytofirmans PsJN

Annotation: urease accessory protein UreE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 227 PF02814: UreE_N" amino acids 15 to 71 (57 residues), 77 bits, see alignment E=6.6e-26 PF05194: UreE_C" amino acids 78 to 182 (105 residues), 95 bits, see alignment E=2.7e-31

Best Hits

Swiss-Prot: 91% identical to UREE_PARXL: Urease accessory protein UreE (ureE) from Paraburkholderia xenovorans (strain LB400)

KEGG orthology group: K03187, urease accessory protein (inferred from 100% identity to bpy:Bphyt_0927)

Predicted SEED Role

"Urease accessory protein UreE" in subsystem Urea decomposition

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T0P4 at UniProt or InterPro

Protein Sequence (227 amino acids)

>BPHYT_RS04505 urease accessory protein UreE (Burkholderia phytofirmans PsJN)
MRTIDKLIAPHLKLAPVLVKRAPTLTLAFDDRRKSRLAATLDSGEEVALLLPRGTVLRDG
DVLVADDGGLVRVVAAPETVLYVRAKDALTLTRAAYHLGNRHTPVEVGADYLKLEFDPVL
ADMLKRIGASVDQVSMPFQPESGAYGGGHKHGHDETFAEDYALAQQVFGEHHGHEHGHDH
EHNHAAQGHSHSHAHDHGHEHAHDHDHGDHVHDESCGHGHHHHHAHR