Protein Info for BPHYT_RS04300 in Burkholderia phytofirmans PsJN

Annotation: family 2 glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 817 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 7 to 243 (237 residues), 34.5 bits, see alignment E=3.1e-12 PF00535: Glycos_transf_2" amino acids 10 to 195 (186 residues), 41.9 bits, see alignment E=1.6e-14 PF13579: Glyco_trans_4_4" amino acids 529 to 632 (104 residues), 32.6 bits, see alignment E=1.5e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_0885)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T0K0 at UniProt or InterPro

Protein Sequence (817 amino acids)

>BPHYT_RS04300 family 2 glycosyl transferase (Burkholderia phytofirmans PsJN)
MNSKKARVGIVIVTFNSAEVFALAIESLIKTRSDTEFVVAAIDNASRPAERAAVQATFEH
AVAQQGLQGKFFQQDKNLGFSGGNNIGIQYCLADPTITHICLLNSDVIVTDHWLDYLVAA
DKDAIGPLTNASNNEQGIPIPYHLGDRNRLGEGSAALDMPVLAEFAIRRREGWLGLTVDS
DFLSYYCVLFSRELLERVGALDERFFPGAYEDDDHCVRILQGGFKMHVARDVYIHHWGSA
SFGKLDVAEAQGFAAQNRARFEEKHGRAWQDRTRLSVTAWMQDSLFAIASPKRFPIHLET
HHLYARQMRTLVEGLEAYSKHLNGEIARWQAEQMNDLRSLVMGRYIDEPVSAASLLPVIN
GIDADIEQYLLTDGEGVSPEVVQRMKVRFESFANELDALVARTSRTARELTAMQAARSQD
KPLSFKQRVTNRLARAARFPTSKVSRLVRGYELLQLLRHGDGILFFAPYPTKERERDGYF
QRVKAIDSLFPSKHRVYCDVRGHPEAKPFIERAAHNAWVLNISLASRNQQRLVALLARRF
KRVYFHSVLRMPNAAAEAALRAPGLKWVLDVHGVVPEEFRMHNDFFSARIHDDCERMAVE
NASRVIVVSQAMGNYLAHKYRELLRAKVIVLPIFALEEGSEGARPYKDGRPTVIYAGGTQ
KWQNVPAMMNVVARALDHADWWMYTPDVEVMRNAAAPEVQNHPNFHVASATRAELNEVYQ
QCHFGFILRDDMVVNHVSCPTKLIEYLAFGIVPIVDTPNIGDFNTYGMRYVSVEDFAKGR
IPDAATRMEMAAHNRAICERLVEQKATGEKELIEALT