Protein Info for BPHYT_RS03610 in Burkholderia phytofirmans PsJN

Annotation: deoxyadenosine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 226 PF01712: dNK" amino acids 20 to 206 (187 residues), 121.8 bits, see alignment E=5.3e-39 PF13671: AAA_33" amino acids 22 to 157 (136 residues), 33.2 bits, see alignment E=9.1e-12

Best Hits

KEGG orthology group: K00904, deoxyguanosine kinase [EC: 2.7.1.113] (inferred from 100% identity to bpy:Bphyt_0742)

Predicted SEED Role

"Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)" in subsystem Purine conversions or PnuC-like transporters (EC 2.7.1.113, EC 2.7.1.76)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.113 or 2.7.1.76

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2SXC4 at UniProt or InterPro

Protein Sequence (226 amino acids)

>BPHYT_RS03610 deoxyadenosine kinase (Burkholderia phytofirmans PsJN)
MNSTPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQELFERPQDNPFLERFY
RDTARYALPTQLHFALQRAQQAQDVSAAHASGTPLVADFMTQKNDIFARLTLQEDEWQLY
RALAARIDVNAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAYLHALCDAYNEFFYH
YDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL