Protein Info for BBR_RS16875 in Bifidobacterium breve UCC2003

Annotation: NagC family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00480: ROK
  • amino acids 11 to 302 (292 residues), 186.5 bits, E=4.2e-59

Best Hits

KEGG orthology group: None (inferred from 89% identity to blj:BLD_0207)

Predicted SEED Role

"Predicted N-acetyl-glucosamine kinase 2, ROK family (EC 2.7.1.59)" in subsystem Chitin and N-acetylglucosamine utilization (EC 2.7.1.59)

MetaCyc Pathways

• N-acetylglucosamine degradation II (3/3 steps found)
• chitin derivatives degradation (3/8 steps found)

KEGG Metabolic Maps

• Aminosugars metabolism
• Nucleotide sugars metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.59

Use Curated BLAST to search for 2.7.1.59

Protein Sequence (304 amino acids)

>BBR_RS16875 NagC family transcriptional regulator (Bifidobacterium breve UCC2003)
MTDNTVNNFRIGVDVGGTKIEAALVDATGAVLNSARIPARHGNAAVVEDIVSVARQAAGT
RFDEVSAIGIGTPGTVDSATGHVGNIVNLDVVSLDMGPEVSRLAGVPVHVENDVNAAAVG
AAVLLGGADGLDGTIAFLNFGTGLAAGIVQNGVLLHGYSGAAGEIGHIPVEPHRLKCPCG
QYGCLETVCSGAAVGRLWPNADPPMPDLIRCASRREAKAVDVLDMVVRAIGDTIQILAQS
VDPRLIVLGGGMAKTGEPLVEVITAELRRRESQCRFLESLDLPARLRLAPAGQPVGAIGA
AMAA