Protein Info for BBR_RS16845 in Bifidobacterium breve UCC2003

Annotation: bifunctional folylpolyglutamate synthase/dihydrofolate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 533 TIGR01499: bifunctional protein FolC" amino acids 34 to 455 (422 residues), 337.5 bits, see alignment E=7.6e-105 PF08245: Mur_ligase_M" amino acids 56 to 289 (234 residues), 50 bits, see alignment E=3.7e-17 PF02875: Mur_ligase_C" amino acids 313 to 386 (74 residues), 33.6 bits, see alignment E=4.1e-12

Best Hits

KEGG orthology group: K11754, dihydrofolate synthase / folylpolyglutamate synthase [EC: 6.3.2.12 6.3.2.17] (inferred from 90% identity to bll:BLJ_1262)

Predicted SEED Role

"Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17)" (EC 6.3.2.12, EC 6.3.2.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.2.12 or 6.3.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (533 amino acids)

>BBR_RS16845 bifunctional folylpolyglutamate synthase/dihydrofolate synthase (Bifidobacterium breve UCC2003)
MSFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHVTGTN
GKGSTARMAEAICRAYGMRTGLYTSPHLEKVNERIAIDGQQLSDDDFIDVWDQTKDLVAL
VDAKMEEQGKPKMSFFEVLTAMAIWKFADAPVDVAVVEVGMGGLWDATNVLNADAAVIGP
VDMDHMQWLGDTVEQIAGEKAGIIKPNCTAIIGAQPHEEAVMPILEEAAERNHAMLVRDG
YEMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALAAAEVVIPVNGPLD
GDLVAEALGSVKIPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMM
RDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAVEVFGRDRVIKEPNLPDAIQ
TAVNMVDAEDELGVGYGHGVLVCGSFVTAGDARTMLAEHASPTMQQAMAIHQPAVDLDDA
TDGHGDQPGADTLEDNVSPDDFDVFDVLGLGDAAKNNNADGSSDQDSSAGSDA