Protein Info for BBR_RS15455 in Bifidobacterium breve UCC2003
Annotation: orotate phosphoribosyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 99% identical to PYRE_BIFLD: Orotate phosphoribosyltransferase (pyrE) from Bifidobacterium longum (strain DJO10A)
KEGG orthology group: K00762, orotate phosphoribosyltransferase [EC: 2.4.2.10] (inferred from 98% identity to bll:BLJ_0956)MetaCyc: 47% identical to orotate phosphoribosyltransferase (Escherichia coli K-12 substr. MG1655)
Orotate phosphoribosyltransferase. [EC: 2.4.2.10]
Predicted SEED Role
"Orotate phosphoribosyltransferase (EC 2.4.2.10)" in subsystem De Novo Pyrimidine Synthesis (EC 2.4.2.10)
MetaCyc Pathways
- superpathway of histidine, purine, and pyrimidine biosynthesis (39/46 steps found)
- UMP biosynthesis II (6/6 steps found)
- UMP biosynthesis III (6/6 steps found)
- UMP biosynthesis I (5/6 steps found)
- superpathway of pyrimidine ribonucleotides de novo biosynthesis (7/9 steps found)
- superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (13/18 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.2.10
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-positive bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (231 amino acids)
>BBR_RS15455 orotate phosphoribosyltransferase (Bifidobacterium breve UCC2003) MAETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIATLGAFYAEKISQ AIVHNTIPRNIDTVFGPAYKGIPLAVSTAIALTAGHNMTVGYTFDRKEKKDHGDGGWMVG TPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGLVLSVDRMEKTKDSDLSAVKA VEAEFGFPVLAIANVREIFDAAAKMKNADSTPLLSHDIQQRAAAYLEEYGA