Protein Info for BBR_RS15455 in Bifidobacterium breve UCC2003

Annotation: orotate phosphoribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 231 TIGR00336: orotate phosphoribosyltransferase" amino acids 11 to 197 (187 residues), 154 bits, see alignment E=1.7e-49 PF00156: Pribosyltran" amino acids 42 to 187 (146 residues), 84.4 bits, see alignment E=2.8e-28

Best Hits

Swiss-Prot: 99% identical to PYRE_BIFLD: Orotate phosphoribosyltransferase (pyrE) from Bifidobacterium longum (strain DJO10A)

KEGG orthology group: K00762, orotate phosphoribosyltransferase [EC: 2.4.2.10] (inferred from 98% identity to bll:BLJ_0956)

MetaCyc: 47% identical to orotate phosphoribosyltransferase (Escherichia coli K-12 substr. MG1655)
Orotate phosphoribosyltransferase. [EC: 2.4.2.10]

Predicted SEED Role

"Orotate phosphoribosyltransferase (EC 2.4.2.10)" in subsystem De Novo Pyrimidine Synthesis (EC 2.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (231 amino acids)

>BBR_RS15455 orotate phosphoribosyltransferase (Bifidobacterium breve UCC2003)
MAETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIATLGAFYAEKISQ
AIVHNTIPRNIDTVFGPAYKGIPLAVSTAIALTAGHNMTVGYTFDRKEKKDHGDGGWMVG
TPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGLVLSVDRMEKTKDSDLSAVKA
VEAEFGFPVLAIANVREIFDAAAKMKNADSTPLLSHDIQQRAAAYLEEYGA