Protein Info for BBR_RS15380 in Bifidobacterium breve UCC2003

Annotation: thiaminase II

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 PF03070: TENA_THI-4" amino acids 27 to 234 (208 residues), 147.5 bits, see alignment E=2.5e-47 TIGR04306: thiaminase II" amino acids 31 to 234 (204 residues), 160.5 bits, see alignment E=2.2e-51

Best Hits

KEGG orthology group: K03707, thiaminase (transcriptional activator TenA) [EC: 3.5.99.2] (inferred from 100% identity to blo:BL0804)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.99.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (245 amino acids)

>BBR_RS15380 thiaminase II (Bifidobacterium breve UCC2003)
MMTFDAAAFGPITLDHLPPFAQRLREAANLVWEEGYRQPFLRELGNGTLDRERFAFYLLQ
DYRYLNDYAKVHALALTKTQDPEVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSV
RQSAFARAYTSNILSIAYGNPLVDVLVAVLPCAWVYADYGQRLAAEFTDTLDSNPYKSWV
DMYKTEEFWSSSAWLIEHIEQLTEHLSAERKDELVDVFVTGVQNEYMFWSSAYDMQYTWK
PEWDV