Protein Info for BBR_RS14775 in Bifidobacterium breve UCC2003

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 237 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF05901: Excalibur" amino acids 202 to 237 (36 residues), 62.8 bits, see alignment 1.5e-21

Best Hits

KEGG orthology group: None (inferred from 92% identity to bll:BLJ_0825)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (237 amino acids)

>BBR_RS14775 hypothetical protein (Bifidobacterium breve UCC2003)
MLNNGVPFGNMKRVNRAVWALTVILMMVLGLVLAGCSGSSDGADGKEESIYSKIVAIAKK
GRSLANVKDELKDAGFSSSDYEVKSDTDKMVLRASNWVVQSVEDGDKPVINVRKASDIAQ
EEEAKKVAEEKKAAEEAAAKKVAEEKKAAEEAAAKKAAEEEAARKAAEEQAAAQAEAQRQ
AEEAARQAQQQQQQQAQQNVHYANCSAVRAAGAAPLYQGQPGYNGKLDRDHDGVACE