Protein Info for BBR_RS14635 in Bifidobacterium breve UCC2003

Annotation: amino acid ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 PF00005: ABC_tran" amino acids 32 to 181 (150 residues), 133.7 bits, see alignment E=1.1e-42 PF02463: SMC_N" amino acids 42 to 220 (179 residues), 40.1 bits, see alignment E=4.2e-14 PF13304: AAA_21" amino acids 144 to 211 (68 residues), 31.5 bits, see alignment E=2.8e-11

Best Hits

Swiss-Prot: 52% identical to GLUA_CORGL: Glutamate transport ATP-binding protein GluA (gluA) from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)

KEGG orthology group: None (inferred from 66% identity to ljf:FI9785_898)

MetaCyc: 50% identical to glutamate/aspartate ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-13-RXN [EC: 7.4.2.1]; 7.4.2.1 [EC: 7.4.2.1]

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (262 amino acids)

>BBR_RS14635 amino acid ABC transporter ATP-binding protein (Bifidobacterium breve UCC2003)
MADSEEVSVSNDSEPLLSVRHLRKSYGDHEVLKDVSFDVKRGQVLVLLGPSGSGKSTLIR
CLNGLETIQGGEIWFKGQKIANNSEKTWRKLRAEIGMVFQSYDLFPNLTVAKNIELGPTK
VQKRPKAEVAKQMDQLLADVQLTEYKNSYPRELSGGQKQRIAVVRALAMNPELMLFDEVT
ASLDPEMVREVLELMLRLAKRHMTMIVVTHEMEFARRVADTVMFLENGVILERQPGDEFF
TNPETDRARNFLESMAPVGDEA