Protein Info for BBR_RS14460 in Bifidobacterium breve UCC2003
Annotation: amidohydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 42% identical to YTNL_BACSU: Uncharacterized hydrolase YtnL (ytnL) from Bacillus subtilis (strain 168)
KEGG orthology group: None (inferred from 94% identity to blb:BBMN68_703)MetaCyc: 42% identical to N-acetyl-L-cysteine deacetylase (Bacillus subtilis subtilis 168)
3.5.1.-
Predicted SEED Role
"Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A" in subsystem p-Aminobenzoyl-Glutamate Utilization
MetaCyc Pathways
- S-(2-succinyl)-L-cysteine degradation (2/4 steps found)
- S-benzyl-L-cysteine degradation (1/5 steps found)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-positive bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (383 amino acids)
>BBR_RS14460 amidohydrolase (Bifidobacterium breve UCC2003) MSEHIDIDHELIAIRHYLHAHPERSFQEFDTSIYLTDQLKAHGIEILPNSMETGVVGLIQ GEAGPGTRIGLRADIDGLPIVEDSGLEFSSVNKGVMHGCGHDLHMTGLLGAAFWLANHRD KFAGSIKILFQPSEETGQGARAMIDAGLVDDVDAIIGTHNNPNYAPGQLAIGVEPMMAGC VKFHVTLHAQGTHAAYPYKGTGPLEALASMILSLQTIVSRNVMPFHPLVLSVTEVHGGDV WNVVPAEAGFQGTVRYFHKEDGNLVGRRFKEVVEHTAEAYGITADVDWNDFQDPLVSNPS LAKAVAADVNDYAQLEPIRPSMAGEDFCEFAKVTLPVFAFVGSNGQEGCADWHSPHFVGL DESIPTFVNFYVNAALRVLNELR