Protein Info for BBR_RS14365 in Bifidobacterium breve UCC2003

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 390 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 43 to 64 (22 residues), see Phobius details amino acids 85 to 107 (23 residues), see Phobius details amino acids 117 to 137 (21 residues), see Phobius details amino acids 148 to 166 (19 residues), see Phobius details amino acids 187 to 210 (24 residues), see Phobius details amino acids 241 to 265 (25 residues), see Phobius details amino acids 271 to 294 (24 residues), see Phobius details amino acids 301 to 320 (20 residues), see Phobius details amino acids 330 to 349 (20 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 92% identity to blm:BLLJ_0641)

Predicted SEED Role

"FIG00424732: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (390 amino acids)

>BBR_RS14365 hypothetical protein (Bifidobacterium breve UCC2003)
MGCHQRAETSGLISFLICAVVGAVSMNLYLQFAPAIWQLTQRRFMVCSGIVAACGVISFI
IGYASKSRSLNLKHGWLAPIRRMFEIIALSVVYASTIFLSSFALIGAASDMMGKALFSGY
LSSVCAAFAGVVGYMTFVQAEMMNAKTIASLLPFFVISGVVTAGMTTDDPYWYHNNFSQL
GDRTTFAARMFNSTLILAGTCIIIVSYFAISELVTTERLQRLWHDHTKADPNRGYEISHF
MFRIVVLSILLTVAGLAFIGIGVFRYTPHNLLHNICAKGLPFVMLLLFVLLPWLAPRLSK
AVMVASDLAALVCAAFWVNMMMGHNTLTNVEALAGLAFLGWFIVFSRQIAAIEADRIAAQ
LLHAQAIEGGLEQPAAEPEQQIESRIAADR