Protein Info for BBR_RS14085 in Bifidobacterium breve UCC2003

Annotation: nicotinate-nucleotide adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 242 TIGR00125: cytidyltransferase-like domain" amino acids 50 to 114 (65 residues), 37 bits, see alignment E=3e-13 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase" amino acids 52 to 238 (187 residues), 176.4 bits, see alignment E=6.6e-56 PF01467: CTP_transf_like" amino acids 52 to 213 (162 residues), 88.6 bits, see alignment E=2.1e-29

Best Hits

Swiss-Prot: 66% identical to NADD_COREF: Probable nicotinate-nucleotide adenylyltransferase (nadD) from Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)

KEGG orthology group: K00969, nicotinate-nucleotide adenylyltransferase [EC: 2.7.7.18] (inferred from 95% identity to blf:BLIF_0606)

Predicted SEED Role

"Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)" in subsystem NAD and NADP cofactor biosynthesis global or NAD regulation (EC 2.7.7.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (242 amino acids)

>BBR_RS14085 nicotinate-nucleotide adenylyltransferase (Bifidobacterium breve UCC2003)
MSSSDPAEIIAVAQGEAERRMSDLSVPGGANSHGKGRLSARGNWHTRLRIGIMGGTFDPI
HNGHLVAASEVAWVYDLDEVIFVPTGRPVFKLDKEVTNAEDRYLMTVIATASNPKFTVSR
VDIDRPGVTYTIDTLKDIRAQHPDAELFFITGADAVAEIMQWKDADLMWDLAHFVAVTRP
GYSSPDGVTLPEGKVDTLEIPALAISSTDVRRRAEHDEPVWYLVPDGVVQYIGKHGLYSK
QH