Protein Info for BBR_RS13365 in Bifidobacterium breve UCC2003

Annotation: aldehyde dehydrogenase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 PF00171: Aldedh" amino acids 19 to 295 (277 residues), 191.9 bits, see alignment E=7.9e-61 amino acids 360 to 487 (128 residues), 84.3 bits, see alignment E=3.6e-28

Best Hits

Predicted SEED Role

"Aldehyde dehydrogenase (EC 1.2.1.3)" in subsystem Entner-Doudoroff Pathway or Glycerolipid and Glycerophospholipid Metabolism in Bacteria or Methylglyoxal Metabolism or Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate (EC 1.2.1.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.1.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (519 amino acids)

>BBR_RS13365 aldehyde dehydrogenase family protein (Bifidobacterium breve UCC2003)
MTNETFEQLKVAYESGLTRPLAWRRAQLNALRRLVMENRDAFISSAMADLGKPAAETVLM
ELNLVAGEAQFVRNRLGLWTARHPKAMHWMLQPAAGWTIAEPKGVVLIISPWNYPVLLAL
EPMADALAAGNAVCLKPSELSPNTSKLLAELVPQYLDAEAVRVVEGGPKETGDLLKNPFN
HIFYTGGGRVGKIVMRAAAENLTPVTLELGGKSPCFVDRTADINVAARRIVWGKFTNAGQ
TCVAPDYVLATPDVAEALAKRIAVAVTEFYGKNPQDSPNFGRIINERHFDRLCKLLPVGT
VPSDEPSSPLIQVASAVGAAVDMVGKRINAAASGNTATEARPDTTETGIVAVPGVVDPAG
RVMCGGKVDRAARYVAPTVLYGTQPDAPVMGEEIFGPILPIVVVEDAEAAIRFINRRSRP
LAAYVFSRDHEVRLAFERQTSSGALGYSLPLGHLLSSRLPFGGVGGSGIGAYHGKEGFRT
FSHIKTVVSKPQFPDTLWLVYPPFNEAKAKLMDLISKLS