Protein Info for BBR_RS13270 in Bifidobacterium breve UCC2003

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 25 to 173 (149 residues), 123 bits, E=7.5e-40

Best Hits

Swiss-Prot: 45% identical to YBBA_SHIFL: Uncharacterized ABC transporter ATP-binding protein YbbA (ybbA) from Shigella flexneri

KEGG orthology group: K02003, (no description) (inferred from 93% identity to bll:BLJ_0554)

MetaCyc: 40% identical to cystine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-290 [EC: 7.4.2.12]; 7.4.2.12 [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]

Predicted SEED Role

"possible ATP binding protein of ABC transporter"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.12

Protein Sequence (270 amino acids)

>BBR_RS13270 ABC transporter ATP-binding protein (Bifidobacterium breve UCC2003)
MARAIIEVRNLRKEYPVEDETVVALDRVTLAIPQGQICCIFGESGSGKSTLLNQLAGMEK
PTRGGVRIGGVPVSKLNERELAAFRQKHIGFVFQSYNLLPNLTALENVAMPLMFRGVSKE
RRDRVARSVLKRVGLGHRLGHYPRQMSGGQQQRVGIARAFVTKPEVVFADEPTGNLDSKT
KTEVMTMICSFARDFNQTIVLVTHDPQMAAYADRIVTLLDGRIVSDQINQGVTVQSISAQ
SIQSAQSDQFVQSVQPTAVPSASVPSVQTV