Protein Info for BBR_RS12865 in Bifidobacterium breve UCC2003

Annotation: S9 family peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 918 PF02897: Peptidase_S9_N" amino acids 13 to 344 (332 residues), 200.7 bits, see alignment E=3.6e-63 PF00326: Peptidase_S9" amino acids 674 to 915 (242 residues), 182.7 bits, see alignment E=7e-58

Best Hits

Predicted SEED Role

"Protease II (EC 3.4.21.83)" (EC 3.4.21.83)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.83

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (918 amino acids)

>BBR_RS12865 S9 family peptidase (Bifidobacterium breve UCC2003)
MTDEKTNAEVPMPPVAKREPKRREFHGDVFEDDYEWMRNKESAEVRDYVAAENRYCEHRM
AHLAGLRNTLFEELKSHVEETDMSVPTRVNDYWYFTRTQQGKQYGVQCRIPVRGENDWES
PVVDAKGEPGSMPGEQIVFDVNRESEGHDFFRLGGMDLSKDGRWLLYGVDVTGDERYDFR
IRDLESLTAADADGAFPDLDMPMADESLSFRDASAAEPAEATAGDEATERPAAAELPEHF
DGIGSACFTPDGKWVFWVEVDDSWRPFAVWRHQVGTSVDDDVCVYREADERFWVGVGISF
DERNIVIGTGSKTTTEVLMLPVVTPEGEFQAFIPRQTDVEYDVSFACFEGAGEHGEDVPL
AVVYHNAVNPNFEIDVIDMRDHKPPYRLGEGVCVAAGSPYGCEHGESDKPITEAYFNPAN
PAILQGAHGLGIEGIALHRHFVSLSYRSDGQPHVAYMTKDAASADFLAGRPWRFVELLPP
PLEGDWDMVAADRQDVTGDHGETLWTDDAEKAESSASASPGTGKSATSMKGDGISKRSGD
WFGGLFGSTTDHTESSDGASDDHLPGETRRLYTIGTGGNPSYDAPRMRYSFASYTRSGEL
HEIDPATGKDTLLKRATVLGDFDPRNYMERRVWITARDGERIPVSLVWHRDCPAQDSPMF
ITGYGAYEISSDPGFSVARLSMLDRGVLYAVPHIRGGGEMGRAWYEQGRRLNKKHSFEDF
VDATRALQDAHLADARRTVANGGSAGGLLMGAIANMAPECYAGVEADVPFVDALTSILDP
DLPLTVTEWDEWGDPLHDPEVYQYMKSYTPYENVPVARAEDGDGETVDDKVSSAGAATGK
AVSAAQFPKIFITTSMNDTRVLYVEPLKWLARLQSAGVDAVAKIEVEAGHGGISGRYKQW
QEVSYENAWCMDVMGLAH