Protein Info for BBR_RS12600 in Bifidobacterium breve UCC2003

Annotation: serine acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 154 PF00132: Hexapep" amino acids 104 to 138 (35 residues), 30.1 bits, see alignment 1.4e-11

Best Hits

KEGG orthology group: K00640, serine O-acetyltransferase [EC: 2.3.1.30] (inferred from 38% identity to pph:Ppha_1012)

Predicted SEED Role

"Serine acetyltransferase (EC 2.3.1.30)" in subsystem Conserved gene cluster possibly involved in RNA metabolism or Cysteine Biosynthesis or Methionine Biosynthesis (EC 2.3.1.30)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (154 amino acids)

>BBR_RS12600 serine acetyltransferase (Bifidobacterium breve UCC2003)
MNNPGVLPKVLVATIRFGMWTEHIRPRILGLPFRLLHRLVELLFCKLLLNCDISVKAEIG
QGLTIYHPYGIFVNSDAKIGRDFTCRAYTTIGNKGTYDERDGCPTIGDGVNVGVGAKIIG
PITVGSNCSIGANAVVTHSFADGNILVGIPAKAI