Protein Info for BBR_RS11470 in Bifidobacterium breve UCC2003
Annotation: 6-phosphogluconolactonase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01057, 6-phosphogluconolactonase [EC: 3.1.1.31] (inferred from 89% identity to bln:Blon_0208)Predicted SEED Role
"6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type" in subsystem Entner-Doudoroff Pathway or Pentose phosphate pathway (EC 3.1.1.31)
MetaCyc Pathways
- heterolactic fermentation (16/18 steps found)
- pentose phosphate pathway (8/8 steps found)
- superpathway of glucose and xylose degradation (14/17 steps found)
- pentose phosphate pathway (oxidative branch) I (3/3 steps found)
- Entner-Doudoroff pathway I (7/9 steps found)
- superpathway of glycolysis and the Entner-Doudoroff pathway (12/17 steps found)
- formaldehyde oxidation I (3/6 steps found)
KEGG Metabolic Maps
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of plant hormones
- Pentose phosphate pathway
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.1.1.31
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-positive bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (280 amino acids)
>BBR_RS11470 6-phosphogluconolactonase (Bifidobacterium breve UCC2003) MATRKLVVYPDKDLMIQAGAQRFALALLDLLAERLPDSTHRTRVDVALSGGSAAQPLGLV LDDPLAEAIDWSRVHFWWSDERFVPAYDTDRNALEARRLLLDKLVADGKLPESNIHEMAA DVRSTDEIADAMANAESDDDAVRAAADAANDALLDAAARDYEAELIRELGPKPTIDLMIL GMGPDGHYASLFPGHDEVKVTDRLAVGVNHSPKMPPLRVSLTAPMIASSRRTWFFAAGAS KVDSLAHVFSKPNNPNYPSSYANGVDEFIWFSTEETVTKL