Protein Info for BBR_RS10660 in Bifidobacterium breve UCC2003

Annotation: esterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 460 transmembrane" amino acids 18 to 40 (23 residues), see Phobius details amino acids 52 to 73 (22 residues), see Phobius details amino acids 85 to 108 (24 residues), see Phobius details amino acids 115 to 136 (22 residues), see Phobius details PF00756: Esterase" amino acids 203 to 434 (232 residues), 34.3 bits, see alignment E=1.1e-12

Best Hits

KEGG orthology group: None (inferred from 78% identity to blb:BBMN68_1302)

Predicted SEED Role

"FIG00426290: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (460 amino acids)

>BBR_RS10660 esterase (Bifidobacterium breve UCC2003)
MRNSVWKTLMELSLIRGIVPQTVFGVTAVAALVLLIGLVVGKRNRAHRMHPLIVSLIVAV
AAGAVGLLAAWLVSDVFMAFEVSLGWPVIFTIAGGIAAVGFVIAAAVIVQGLRRVVAIIL
VPLILVSTALGVDSIYGEYQTIGNLVGYSPYASLSSVKVHESAMSVDQWRKRAQRNDLPD
MPQTGKVLTATIPNTKSNFAARPAMIYLPPAALSEMPPTLPVMELMAGQPGSPSRLIDAG
NIAAMMDSYAAKHDGLAPIVIVPDQNGEASHNSLCADTTQGNAETYLTKDVVVWAKRNLP
VAKSAKMWAIGGFSQGGTCTTQLGPRHPELYGAMLPVDGELKPTNGTVAKMVKEYFAGDQ
SAYDAQVPVNVIAATGSSDQALFSGAGERDKESIHNMRLIAQAARKVGMDVTELVVPDTG
HDWHAVQAVWRAGLDWFGERTGLGEMPQPLEDYNQVEVLQ