Protein Info for BBR_RS10495 in Bifidobacterium breve UCC2003

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 604 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF08757: CotH" amino acids 154 to 481 (328 residues), 258.1 bits, see alignment E=7.9e-81

Best Hits

KEGG orthology group: K06330, spore coat protein H (inferred from 88% identity to bll:BLJ_1528)

Predicted SEED Role

"FIG01031817: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (604 amino acids)

>BBR_RS10495 hypothetical protein (Bifidobacterium breve UCC2003)
MTWWNRRNTKAITTLVKQIAALIAMLMVLSCAGCATSSPSDNEQSQSSDSTQTHEQVKKS
AEQSIDGAHLRDNESLYKVYDDSGVETMYLTVSRGNSSEGTDHSWSEINQYSVDDYAAMG
VGRYKVNGLLQVGDEQGPVSGELGFGESAPNATVQVRGQSSSKNEQKNYKIELKSGKGKW
RGQRTIALNKHMGEGLRFRNKMAFDLIKGIDQMMGLRTQFVHLYVKDETSGSDSFDDYGL
YTQVEQLNKTALQAHGLDKNGQLYKVNYFEFHRDEDVIKLADDPDYDQTKFEEKLEIKGD
NDHTKLIAMLNALNDYSVPMSDILGKYFDTENLAYWMAFQLLTGNTDTQSRNMYLYSPTN
SDTFYVLDWDNDGMLMRKEYEIKQRSDGKSWENGISNYWGNMLFSRCLQTKSFRTALDKA
IQDEYKYMNANRINSMVKHYRSITEQYVWKMPDSMYEGVTRSQYDVIANQLHSEIEQNYQ
TYQTGFNKPMPFYIGTPTPTNGKLKLSWDVSYDFNDEDLRYTVTVSKDYEGKDVVFTQSD
LVLPEAVMDMPGEGQYFIKVSVRNASGETQDAFDYYVTDGNKIYGTKCFYVKAGGSIVED
ANVQ