Protein Info for Ac3H11_973 in Acidovorax sp. GW101-3H11

Annotation: Putative analog of CcoH, COG3198

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 91 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details PF05751: FixH" amino acids 21 to 74 (54 residues), 49.9 bits, see alignment E=1.9e-17

Best Hits

KEGG orthology group: K09926, hypothetical protein (inferred from 76% identity to vei:Veis_1165)

Predicted SEED Role

"Putative analog of CcoH, COG3198" in subsystem Biogenesis of cbb3-type cytochrome c oxidases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JTG7 at UniProt or InterPro

Protein Sequence (91 amino acids)

>Ac3H11_973 Putative analog of CcoH, COG3198 (Acidovorax sp. GW101-3H11)
MSSNPAIAPAASAPWWKFGHVWLVIAGPAIVIVAGFVTLWLAVSRPDPVVAEDYYRKGIE
INKTLEAPEKSLAPAMKGRNHAVTPVQDQPR