Protein Info for Ac3H11_740 in Acidovorax sp. GW101-3H11

Annotation: Aspartate ammonia-lyase (EC 4.3.1.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 563 signal peptide" amino acids 1 to 40 (40 residues), see Phobius details TIGR02231: conserved hypothetical protein" amino acids 44 to 558 (515 residues), 244.4 bits, see alignment E=1.2e-76 PF13600: DUF4140" amino acids 48 to 137 (90 residues), 53.5 bits, see alignment E=2.7e-18 PF13598: DUF4139" amino acids 234 to 555 (322 residues), 189.7 bits, see alignment E=5.6e-60

Best Hits

KEGG orthology group: None (inferred from 55% identity to vap:Vapar_3625)

Predicted SEED Role

"Aspartate ammonia-lyase (EC 4.3.1.1)" in subsystem Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 4.3.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.3.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JEZ8 at UniProt or InterPro

Protein Sequence (563 amino acids)

>Ac3H11_740 Aspartate ammonia-lyase (EC 4.3.1.1) (Acidovorax sp. GW101-3H11)
MRPVSPPFLPLLRTPLALLQALVMAGLAGLAALPATVHAQDSSRIARVTVYPGSATVERV
AKVAAGARSLRLACLPASLDVQSLQINADPAVRVGEFNVLTEDRDVAAGCASPLDGRIRE
LEDQIAGVKAEASALQLVDGYLRSVAHAGTGEEAATAAGARAASPTPAQITATAEVLRKS
GQDSFARAHQLQRKQEALELALKPLVAERDRVASQRARVVSVTINLAAEREAELRLSYQV
RGPGWQPSYRATLDATKATVLIERQALVAQNSGEDWSGVQLTLSTGQPGRATQGQLPRPW
WLNVAPPPQGAGTQMGMVAMASAPAPAMAPLPRSRNAAEEAMPTFDVSALDKGFATEFAV
PQRITVPSSGQRVTLALGNHTAPATLLTRAAPAVEEAAYLVAQIAQPPGVWPAGAAGLYR
DGAFVGNGRIDFGAPSAGAPAGSTSLSFGRDELVTVRAEPEQDVTGSSGFVGSRVERKTR
RAYSVXNRHKTGITLQLLHAAPVSRNEKIEVESRYQPQPTDLAWNRSAGTIAWQPPLAAG
ATAQFSAEHTVRYPKDIELLERR