Protein Info for Ac3H11_739 in Acidovorax sp. GW101-3H11

Annotation: Phosphatidylglycerophosphatase A (EC 3.1.3.27)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 175 transmembrane" amino acids 18 to 37 (20 residues), see Phobius details amino acids 44 to 61 (18 residues), see Phobius details amino acids 67 to 89 (23 residues), see Phobius details amino acids 101 to 126 (26 residues), see Phobius details amino acids 152 to 173 (22 residues), see Phobius details PF04608: PgpA" amino acids 29 to 172 (144 residues), 113.5 bits, see alignment E=4e-37

Best Hits

KEGG orthology group: K01095, phosphatidylglycerophosphatase A [EC: 3.1.3.27] (inferred from 78% identity to aav:Aave_0430)

Predicted SEED Role

"Phosphatidylglycerophosphatase A (EC 3.1.3.27)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 3.1.3.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.27

Use Curated BLAST to search for 3.1.3.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JBL4 at UniProt or InterPro

Protein Sequence (175 amino acids)

>Ac3H11_739 Phosphatidylglycerophosphatase A (EC 3.1.3.27) (Acidovorax sp. GW101-3H11)
MTPLSPSGAPSAPRRPTVAFLLGHPAHFIALGFGAGLSRKAPGTVGTLWAWLAYLVLQQW
LSPQHMGWLIAASTLVGWWACTTTARHMAVADPGSIVWDEVVAFWLVLWLAMPMGFWGQL
TAFALFRFFDAAKPGPVGWADSLFKGFGWRGGWGILWDDFVAAFCTLLVIALWRF