Protein Info for Ac3H11_665 in Acidovorax sp. GW101-3H11

Annotation: Magnesium and cobalt transport protein CorA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 328 transmembrane" amino acids 269 to 289 (21 residues), see Phobius details amino acids 302 to 321 (20 residues), see Phobius details TIGR00383: magnesium and cobalt transport protein CorA" amino acids 3 to 327 (325 residues), 236.9 bits, see alignment E=1.8e-74 PF01544: CorA" amino acids 27 to 323 (297 residues), 189.3 bits, see alignment E=5.1e-60

Best Hits

KEGG orthology group: K03284, metal ion transporter, MIT family (inferred from 91% identity to vei:Veis_2550)

Predicted SEED Role

"Magnesium and cobalt transport protein CorA" in subsystem Campylobacter Iron Metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JW25 at UniProt or InterPro

Protein Sequence (328 amino acids)

>Ac3H11_665 Magnesium and cobalt transport protein CorA (Acidovorax sp. GW101-3H11)
MLNIFTLANGRLFQEEIESLEELTKFQPIWVDLEAPTLEEKRWIKQHYGLSIPEDAMDED
IEESARFYEEDNGELHIRSDFLIDDDEDPRSVRVAFILNQHNTNLKSRGVLFSIHDEDVP
VFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLEGIYDELEKVSTQVLAGDVTDA
RAGEVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAEQFEEARQILRDIESLDNH
TAFLFDKINFLMDATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWS
LGYPYALGLMLASALGPMWYFRKRGWLK