Protein Info for Ac3H11_655 in Acidovorax sp. GW101-3H11

Annotation: PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 246 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 70 to 88 (19 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 152 to 170 (19 residues), see Phobius details amino acids 177 to 196 (20 residues), see Phobius details amino acids 207 to 228 (22 residues), see Phobius details PF01569: PAP2" amino acids 98 to 221 (124 residues), 39.8 bits, see alignment E=1.9e-14

Best Hits

KEGG orthology group: None (inferred from 69% identity to vei:Veis_0197)

Predicted SEED Role

"PAP2 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JVV3 at UniProt or InterPro

Protein Sequence (246 amino acids)

>Ac3H11_655 PAP2 family protein (Acidovorax sp. GW101-3H11)
MMTTQPPSHRSAHRHRTLFLWTLCLLAAVVAWDLGGQDIPLAGLFGSGAGFPLRDHWFFV
QVLHEGGRRLGWLLVLLLALGVWWPQGVLRRLDAGERLQMALSALLALAAVSVGKNLSTT
SCPWDLAEFGGVARYASHWALGVIDGGGGRCFPAGHASAGFAFVGGYFALRHKAPIAARW
WLAGAVLAGLALGGAQQVRGAHFMSHTLWTGWLCWTVGWLCDLAASALRPRLAALSLAND
PPHAAS