Protein Info for Ac3H11_640 in Acidovorax sp. GW101-3H11

Annotation: putative exported protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF03401: TctC" amino acids 51 to 319 (269 residues), 278 bits, see alignment E=3.5e-87

Best Hits

Swiss-Prot: 36% identical to YCLC_PSEPU: UPF0065 protein in clcB-clcD intergenic region from Pseudomonas putida

KEGG orthology group: None (inferred from 66% identity to ajs:Ajs_1121)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ISI6 at UniProt or InterPro

Protein Sequence (326 amino acids)

>Ac3H11_640 putative exported protein (Acidovorax sp. GW101-3H11)
MALPRSQGLLAAALCGFAQLASAQAQAPAWPTKTLTIVVPFPAGGTTDVLARAVSTKLAT
ALGKPVIVDNKPGAGATLGALLVAKAPADGHTLLMGAVHHTVAPSVYKNLQYSFEKDFAP
ISTVALVPNVLVVSAKAPYGSVKDLIATGKAAPEKLSYGSNGNGTAQHMIGTQFQMETGA
KVLHVAYKGSAPLTTDLLGGQIDMSFDTITPVLPFIKDGKLKALAVTTAKRSSALPNVPT
LQEMGVPHIAIGTWFGLLAPAATPKGVVAQLNAEVVRIVHSPEFKKQMLDIGAEPIGNRP
EEMAAQIKEETEKFAHLVKVGKVTLD