Protein Info for Ac3H11_589 in Acidovorax sp. GW101-3H11

Annotation: NnrS protein involved in response to NO

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 139 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 36 to 54 (19 residues), see Phobius details amino acids 66 to 88 (23 residues), see Phobius details amino acids 94 to 119 (26 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 50% identity to mpt:Mpe_A1717)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165IRA3 at UniProt or InterPro

Protein Sequence (139 amino acids)

>Ac3H11_589 NnrS protein involved in response to NO (Acidovorax sp. GW101-3H11)
MFYAINWFLSLALLALWSLACWGTHAVTVWVVSSAGALTGGSAVATTILVPGWLKAWMPP
ELMGQWEVFVSSVGPVVQAVLEAVPALAGGITFLAWALWGVGAIVLVAFAVSIHILIGLV
KRHSGGTGSPGTTKEALAR