Protein Info for Ac3H11_4687 in Acidovorax sp. GW101-3H11

Annotation: Sterol desaturase-related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 596 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 47 to 57 (11 residues), see Phobius details amino acids 77 to 99 (23 residues), see Phobius details amino acids 139 to 165 (27 residues), see Phobius details amino acids 304 to 325 (22 residues), see Phobius details amino acids 333 to 353 (21 residues), see Phobius details amino acids 359 to 379 (21 residues), see Phobius details amino acids 385 to 404 (20 residues), see Phobius details amino acids 415 to 433 (19 residues), see Phobius details amino acids 439 to 457 (19 residues), see Phobius details amino acids 469 to 487 (19 residues), see Phobius details amino acids 493 to 512 (20 residues), see Phobius details amino acids 523 to 542 (20 residues), see Phobius details amino acids 553 to 572 (20 residues), see Phobius details PF04116: FA_hydroxylase" amino acids 85 to 218 (134 residues), 109 bits, see alignment E=2.5e-35 PF07947: YhhN" amino acids 382 to 570 (189 residues), 154 bits, see alignment E=3.5e-49

Best Hits

KEGG orthology group: None (inferred from 74% identity to dia:Dtpsy_0500)

Predicted SEED Role

"Sterol desaturase-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LS77 at UniProt or InterPro

Protein Sequence (596 amino acids)

>Ac3H11_4687 Sterol desaturase-related protein (Acidovorax sp. GW101-3H11)
MSPSQIIVLATPVFFLLIAIELAIGYKRQRNTYRLADAVSSISLGMLSQTSAVFTRLLRI
GIYTALFEHLALWRNDVFWTSLPGWLLALVFYDFCYYWLHRMGHESAVLWAAHAVHHQSQ
DYNLSTALRQTSSGALLGWVFYVPMALAGVPPLVFAVVALIDLLYQFWVHTEQVGRLGWF
DRWFCSPSNHRVHHAVNDPYLDKNYGGVLIVWDRMFGTFKDEDDQERCVYGTRGLLNSWD
PLWANAQVYAGLAHDSWHARSWLDKLKVWIKPPGWRPADVAERFPKPAFSMAQMQLYHPP
MSQAVQGFALVQFGMLLAGVAAFLWQADAAPLTHNAIWFAVLLVSQWALGAVMQGRIGMW
MALMVQSAALATATSALGLTEWHWVFKPLTMVIAIILIAISAYPLRAKGLFDSKSWWLMA
AALAGSLAGDVFLMVSGFFIPGLVSFLVAHLFYVALFKSGQRWFPHRGALLATLGIGVAM
YAFLWAGGLPPALRAPVAAYVLVIALMAAQAIGRATVLRDGPALLVALGAGFFMLSDSLL
ATNRFVQPLPWSQVWVLSTYYAAQALIVGGWLRGQQAGGSAPGRSHPAAPTAAITA