Protein Info for Ac3H11_4686 in Acidovorax sp. GW101-3H11

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 287 transmembrane" amino acids 43 to 68 (26 residues), see Phobius details amino acids 76 to 97 (22 residues), see Phobius details amino acids 117 to 137 (21 residues), see Phobius details amino acids 171 to 192 (22 residues), see Phobius details amino acids 198 to 216 (19 residues), see Phobius details amino acids 253 to 276 (24 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LS72 at UniProt or InterPro

Protein Sequence (287 amino acids)

>Ac3H11_4686 hypothetical protein (Acidovorax sp. GW101-3H11)
MARQKRRGRKHLPPRKKSAPLLADEDFAARMGLSPFQWTVQQLALVLACASVCLHAFITL
CYGVAPVFVGAPVSLMGLPALVWLVADGVWAWALVCTLRRRWGPPRDLPVDPRSAWRYGG
GFCLAAVAVGLAVAGAWQPLWRGLAGAGASWPLWPVQVALPVCLPLAREPWAGWAIAVAF
GALVVSVVALKWLAQARVFLVLMAVSLAAFAAWVWGEACVRFAGARGLAGVALPAIQAEA
LAAPADFNAWVWALWWTGVLLWLAAASAAAGVFHLPRVALEAMRQRA