Protein Info for Ac3H11_4665 in Acidovorax sp. GW101-3H11

Annotation: FIG00953527: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 190 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF11937: DUF3455" amino acids 49 to 188 (140 residues), 115.7 bits, see alignment E=1.4e-37

Best Hits

KEGG orthology group: None (inferred from 73% identity to lch:Lcho_1271)

Predicted SEED Role

"FIG00953527: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LRM3 at UniProt or InterPro

Protein Sequence (190 amino acids)

>Ac3H11_4665 FIG00953527: hypothetical protein (Acidovorax sp. GW101-3H11)
MHTQPLHTRLAPWTLALATATMLTACGAMKPASSPIYSQDSLPDTIKVPAGHKVAMETVG
VGEITYECRDKANMPGQTEWVFVGPKAVLNDRSGKQVGTYYGPPATWESSDGSKLTATQL
AVAPSGAGNLPYQLVKANPAMGSGAMVGVTYIQRVALKGGVAPATACTMANKGAREIVKY
QADYIFWKAA