Protein Info for Ac3H11_4579 in Acidovorax sp. GW101-3H11

Annotation: Chromate transport protein ChrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 149 transmembrane" amino acids 13 to 37 (25 residues), see Phobius details amino acids 41 to 63 (23 residues), see Phobius details amino acids 75 to 97 (23 residues), see Phobius details amino acids 103 to 121 (19 residues), see Phobius details amino acids 128 to 146 (19 residues), see Phobius details PF02417: Chromate_transp" amino acids 1 to 138 (138 residues), 104.9 bits, see alignment E=2.5e-34

Best Hits

Predicted SEED Role

"Chromate transport protein ChrA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (149 amino acids)

>Ac3H11_4579 Chromate transport protein ChrA (Acidovorax sp. GW101-3H11)
VVKEYAWLTDRQFVDAVAVAMITPGPVVITTGFIGFLISGFWGAVVAALATFMPCYLLTV
IPAPYFEKHGKHPGVLAFVDEVTAAAVGAIAGAVVVLGQRSVVDLPTAALFLATAAVLWR
FKKLPAPVVLLAAALMGLAVYPLVAHVQP