Protein Info for Ac3H11_4454 in Acidovorax sp. GW101-3H11

Annotation: LSU ribosomal protein L11p (L12e)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01632: ribosomal protein uL11
  • amino acids 3 to 141 (139 residues), 209.1 bits, E=1.2e-66
• PF03946: Ribosomal_L11_N
  • amino acids 9 to 67 (59 residues), 98.1 bits, E=1.9e-32
• PF00298: Ribosomal_L11
  • amino acids 72 to 140 (69 residues), 93.3 bits, E=1e-30

Best Hits

Swiss-Prot: 97% identical to RL11_VEREI: 50S ribosomal protein L11 (rplK) from Verminephrobacter eiseniae (strain EF01-2)

KEGG orthology group: K02867, large subunit ribosomal protein L11 (inferred from 94% identity to ajs:Ajs_3901)

MetaCyc: 62% identical to 50S ribosomal subunit protein L11 (Escherichia coli K-12 substr. MG1655)

Predicted SEED Role

"LSU ribosomal protein L11p (L12e)" in subsystem Ribosome LSU bacterial

Sequence Analysis Tools

See A0A165LLQ2 at UniProt or InterPro

Protein Sequence (143 amino acids)

>Ac3H11_4454 LSU ribosomal protein L11p (L12e) (Acidovorax sp. GW101-3H11)
MAKKIVGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPLPVVIT
AFADKSFTFIIKTPPATTLIKKAIKLEKGSANALKIKVGKITREQLEEIAKTKMKDMNAA
NVDAAVRTLAGSARSMGVTVEGL