Protein Info for Ac3H11_4348 in Acidovorax sp. GW101-3H11

Annotation: FIG00848497: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 504 transmembrane" amino acids 446 to 468 (23 residues), see Phobius details PF13785: DUF4178" amino acids 78 to 205 (128 residues), 51.1 bits, see alignment E=8.4e-18 amino acids 281 to 417 (137 residues), 77.4 bits, see alignment E=6.3e-26

Best Hits

KEGG orthology group: None (inferred from 70% identity to aaa:Acav_4724)

Predicted SEED Role

"FIG00848497: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K419 at UniProt or InterPro

Protein Sequence (504 amino acids)

>Ac3H11_4348 FIG00848497: hypothetical protein (Acidovorax sp. GW101-3H11)
MATDPTQRYYRAPCPGCGAPVEFKSAQSTHAVCGYCQSTVVRSGDVLTRLGKMAELFDDH
SPLQLMASGRIQLDGKDVPFTLIGRLQYKGDAGVWTEWAAFLNDGTLATLGEDNGAYVFT
RPIDPGREMPAPERFRIGTTTAINGTPYSVAYTGQAQLISAQGELPKLPPLGQPFGMVEL
RSADGEVVSIDYGHTPPNVERGRAVLLEDLQLQGLKDESAKDEKGRQFNCPHCGAPVEVK
LAGTKSITCGSCASIISLDSGVGGELRSAEQDEPVQPLIPLGSKGQLQGVHWQVVGFQHR
MGVEPGDDEHFGWSEYLLYNQKRGFAFLVDSEEGWSMVRPTTGAPQMAATGRSATYMGTK
YDLKYTYEAETTYVLGEFYWQVTRGQKTTNRDFASSKGLLSMEQSPNEITWSAGDKLASD
TVAKAFKLEDKKDALQRDDPGPFVAKSGLGCGTIILLAVVILVLLILLSRCSSCDPRVEN
CSSSSSYRSSGGSYGGYSSGGSHK