Protein Info for Ac3H11_4347 in Acidovorax sp. GW101-3H11

Annotation: FIG027190: Putative transmembrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 365 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13421: Band_7_1" amino acids 42 to 250 (209 residues), 256.8 bits, see alignment E=2.3e-80 PF01145: Band_7" amino acids 58 to 247 (190 residues), 69.2 bits, see alignment E=7.1e-23 PF09851: SHOCT" amino acids 335 to 361 (27 residues), 36.1 bits, see alignment (E = 6e-13)

Best Hits

KEGG orthology group: None (inferred from 88% identity to ajs:Ajs_4099)

Predicted SEED Role

"FIG027190: Putative transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K411 at UniProt or InterPro

Protein Sequence (365 amino acids)

>Ac3H11_4347 FIG027190: Putative transmembrane protein (Acidovorax sp. GW101-3H11)
MMAALFNPSFALGAHMALMDFIKKQFIDIIQWTEEGDGTLAWRFPMRDMEIQNGGQLVVR
ESQMAIFVNEGQVADVFGPGTYKLTTQTLPVLTYLKNWDKLFESPFKSDVYFFSTRQQID
QKWGTPQPITIRDKDFGAVRLRAFGNYAFRIADPKLFHTEISGTRESYPVADLEGQLRGL
VLQNISNAIAGSGLPFLDLAANQVMFADALTKELAPIFAKLGILIESLTVQNVSLPEELQ
KILDQKIGMGMVGNDMAKFMQYQTAQAIPKFAEASGGGGGIAGDAMGLGAGVALGQVLAQ
NLQQGLQTPVAPAAAAAAQAAAAPVGVRPEEVMATLEKLGDLKAKGILTQEEFDTKKAEL
LKKLV