Protein Info for Ac3H11_4286 in Acidovorax sp. GW101-3H11

Annotation: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 496 PF01546: Peptidase_M20" amino acids 103 to 482 (380 residues), 76.8 bits, see alignment E=2.3e-25 PF07687: M20_dimer" amino acids 215 to 382 (168 residues), 33 bits, see alignment E=5e-12

Best Hits

KEGG orthology group: None (inferred from 85% identity to vei:Veis_1202)

Predicted SEED Role

"Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K295 at UniProt or InterPro

Protein Sequence (496 amino acids)

>Ac3H11_4286 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases (Acidovorax sp. GW101-3H11)
MNARVPAHALQPALALERVSQAWDNDIVRQLTDYIAIPAKSPMFSPDWAAQGLLDTVVRN
AAAWVESQKVEGLKLEVVRLEGRTPVLFFEIDATQAGATDTVLMYGHLDKQPEFSGWRND
LGPWTPKYEDGKLYGRGGADDGYAVYASIAAVQELKRQNVPHPRIVGLIETCEESGSRDL
LPYIEALKPRMGNVALVVCLDSGAGNYDQLWLTTSLRGMATGTLKVEILTEGIHSGDASG
LVPSSFRIMRQVLDRLEDSATGRLLPASFHCEVPADRLGQARATAAILGDEVYKRFPWAH
YDCGGATTFALPTTTDPVQALLKRTWEPTLSVTGAEGFPALQDAGNVLRPYTAFKLSLRL
PPLVDAGQAVQELKALLEDNAPYQAKVTFQGTSGATGWNAPATTPWFEQALNEASQAHFG
APCGYIGQGGTIPLMNMLSEGFPTAQMMVCGVLGPKSNAHGPNEFLHVPYAKKLTAAVAQ
VIAGMAQHQAATAAAD