Protein Info for Ac3H11_4030 in Acidovorax sp. GW101-3H11

Annotation: Cytochrome c-type biogenesis protein ResA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 transmembrane" amino acids 31 to 50 (20 residues), see Phobius details PF00578: AhpC-TSA" amino acids 71 to 147 (77 residues), 64.7 bits, see alignment E=1.2e-21 PF08534: Redoxin" amino acids 74 to 187 (114 residues), 71.5 bits, see alignment E=1e-23 PF13905: Thioredoxin_8" amino acids 85 to 178 (94 residues), 37.6 bits, see alignment E=3.5e-13

Best Hits

KEGG orthology group: None (inferred from 64% identity to aaa:Acav_0787)

Predicted SEED Role

"Cytochrome c-type biogenesis protein ResA" in subsystem Biogenesis of c-type cytochromes

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LZ81 at UniProt or InterPro

Protein Sequence (198 amino acids)

>Ac3H11_4030 Cytochrome c-type biogenesis protein ResA (Acidovorax sp. GW101-3H11)
MTKTTPSDLPESAPVSPTVLPQAPSATRRRLLYAGVAGAAAVGGAGLAWWKFQPHAMEAG
AEQALWGMEFEKPEGGVVALKSFSGKPLLLNFWATWCPPCVEELPMLNAFYREHAAKGWQ
VLGLAIDQPSAVRKFLARLPLEFPVGLAGLGGTDLGRSLGNLTGGLPFTVVLGGEGRVLH
RKMGQVTPQDLQLWAPLR